BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B08SP1|AL425644
(751 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1570 1481 0.0
>3x_Contig1570
Length = 12233
Score = 1481 bits (745), Expect = 0.0
Identities = 748/751 (99%)
Strand = Plus / Minus
Query: 1 agtctgattatctttcaaggtccttgaccatctggataaatgcaaaccacataaaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7825 agtctgattatctttcaaggtccttgaccatctggataaatgcaaaccacataaaaacaa 7766
Query: 61 caaaactgtcaccacagccaaggcctttagccttaaattagaaatatgaacgtcacgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7765 caaaactgtcaccacagccaaggcctttagccttaaattagaaatatgaacgtcacgatt 7706
Query: 121 ctccttaatacccattgtttactcgataaaaaccagtcgctctttctacgataccgttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7705 ctccttaatacccattgtttactcgataaaaaccagtcgctctttctacgataccgttta 7646
Query: 181 caacgtcaaagcttcaaattctgagtcttctctctctttgctgtaataatagcacaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7645 caacgtcaaagcttcaaattctgagtcttctctctctttgctgtaataatagcacaaacc 7586
Query: 241 tcattaaggatatttaatttatactagctgtacataaatatatctggtcgaaactcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7585 tcattaaggatatttaatttatactagctgtacataaatatatctggtcgaaactcaaag 7526
Query: 301 gttctgcattgccaaaagggttatataaaagaggacgtggggtataatataatagaatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7525 gttctgcattgccaaaagggttatataaaagaggacgtggggtataatataatagaatat 7466
Query: 361 watagtcttgattagtttgtaaaatataacgtacagagccagccatacagagttcttgaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7465 aatagtcttgattagtttgtaaaatataacgtacagagccagccatacagagttcttgaa 7406
Query: 421 tattttawagcttggtgtttctcctgctgcttagtcgatatcatagtttgcatcgtatcc 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7405 tattttaaagcttggtgtttctcctgctgcttagtcgatatcatagtttgcatcgtatcc 7346
Query: 481 ttatctattatccatacatagtgatagaggccgagggaaaaagcaacaaactagcttctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7345 ttatctattatccatacatagtgatagaggccgagggaaaaagcaacaaactagcttctt 7286
Query: 541 ggaaccacttggttgcataaatgacatttaagaatggtcttggcagtgaaaaawaaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7285 ggaaccacttggttgcataaatgacatttaagaatggtcttggcagtgaaaaaaaaaaaa 7226
Query: 601 gcacaaacaaacgcagaagttgcttctggtttcaggtagagagacctttcaaacctttga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7225 gcacaaacaaacgcagaagttgcttctggtttcaggtagagagacctttcaaacctttga 7166
Query: 661 cggaggtttctgtgtcgacagttgtatttgactcatcaccgacaccgttgtacttcttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7165 cggaggtttctgtgtcgacagttgtatttgactcatcaccgacaccgttgtacttcttca 7106
Query: 721 atttttcaatggtcaatgaacccaaatctga 751
|||||||||||||||||||||||||||||||
Sbjct: 7105 atttttcaatggtcaatgaacccaaatctga 7075
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5945
Number of Sequences: 1807
Number of extensions: 5945
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 751
length of database: 10,358,551
effective HSP length: 16
effective length of query: 735
effective length of database: 10,329,639
effective search space: 7592284665
effective search space used: 7592284665
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)